PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022137510.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 321aa    MW: 34722.8 Da    PI: 6.5176
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022137510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73e-14110154347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_022137510.1 110 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 154
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MPRTSEIADS AISGGGDADM DAGGSVTKEI MLFGVRVVVD PMRKSVSMNN LSQYEHPSEA  60
SNDDNGGNNK SSNISTAERK EDAATGYASA DDAVPNSGGN RDRERKRGVP WTEEEHKLFL  120
LGLQKVGKGD WRGISRNFVK TRTPTQVASH AQKYFLRRSN LNRRRRRSSL FDITTDTVNV  180
AAEEDQIQLQ GNSSQLQSLL PPPPPEPCNI NGYHHVMPNF PLSVCPAILP VPIPMEKLTL  240
GHDNLENATS LKQVHPLAAE ILPLNATTPE INLNLKSTIN SGGSLSLNLA LTSDSGDSSM  300
NHLAFQGISG MSSRDNIISV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.24e-56MYB_related family protein