PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137548.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 236aa MW: 27493.4 Da PI: 7.7068

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	1e-17	38	83	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G ++W++Ia+++ gR++k+c++rw++ XP_022137548.1 38 RGHWRPAEDEKLRELVERHGAHNWNAIAQKVE-GRSGKSCRLRWFNQ 83 899***************************.*********996 PP
2	Myb_DNA-binding	51.3	2.7e-16	90	133	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T++E+ +l+ ++ +G++ W+ Iar+++ gRt++ +k++w+ XP_022137548.1 90 RTPFTQDEERRLLASHRIHGNR-WAIIARHFP-GRTDNALKNHWHV 133 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MRDENDGITY NKVCVFIYNY YCFAAAGSES ESERMCSRGH WRPAEDEKLR ELVERHGAHN 60 WNAIAQKVEG RSGKSCRLRW FNQLDPRINR TPFTQDEERR LLASHRIHGN RWAIIARHFP 120 GRTDNALKNH WHVIMARSKR KSKSTQNHHR LFNFPNIYYS SPNPTSSIPN PTPDTSNDHA 180 VVEFYDFLHL NADYITATRS EVIDNSRKDD EEVNQQAQAD DALPLPFIDF FSAQTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	1e-66	MYB family protein