PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022137550.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 152aa    MW: 16581.8 Da    PI: 8.5838
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022137550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260138.72e-43141131100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC ++C +apyfp e+p+kfanvhk+FGasnv kllk++p+++r da+ sl+yeAear+rdPvyG+vg i+ lq+ql+ l++el+
  XP_022137550.1  14 PCAACKFLRRKCLPECDFAPYFPPEEPQKFANVHKVFGASNVGKLLKEVPPHQRADAVVSLAYEAEARIRDPVYGCVGAISCLQKQLHGLQKELD 108
                     7*********************************************************************************************9 PP

          DUF260  96 llkee 100
                     ++k++
  XP_022137550.1 109 AAKAR 113
                     99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MGSSSRSSPH YYSPCAACKF LRRKCLPECD FAPYFPPEEP QKFANVHKVF GASNVGKLLK  60
EVPPHQRADA VVSLAYEAEA RIRDPVYGCV GAISCLQKQL HGLQKELDAA KARLFLYSST  120
ADFSSPLIWN NHISSSSSSS SSASMYFNAG GI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.24e-57LBD family protein