PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137567.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 254aa MW: 28937.6 Da PI: 8.229

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.8	9.4e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva+iifs++gkl+e+ss XP_022137567.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSS 59 79***********************************************96 PP
2	K-box	96.3	4.6e-32	83	174	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +++ ++ e+ +Lk+ +e Lq++qR+llGedL++L+ keL+qLe+qLe+sl++iRs+K+++l++q+ +lq+ke++l e+n+ Lrkk+ee XP_022137567.1 83 QVNENRSYNFDEYLNLKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKTKYLIDQLADLQHKEQMLVEDNQGLRKKVEE 174 45666778889******************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSILCD AEVALIIFSN RGKLFEFSSS 60 SSMTKTLEKY RRCNYGVWEA TRQVNENRSY NFDEYLNLKA TVEFLQQSQR NLLGEDLGPL 120 NPKELEQLEH QLETSLERIR STKTKYLIDQ LADLQHKEQM LVEDNQGLRK KVEERSAQVA 180 AAAAATWDWE AGGGGHSMEH HSRGASQTDA FFHPIIQSTP TLQIGYNPVH SVGLNNNVGP 240 PSQNANGFQL DWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	2e-88	MIKC_MADS family protein