PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137682.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 254aa MW: 28855 Da PI: 4.739

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.1	4.9e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv++yLk+k++g+++el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v+ XP_022137682.1 6 LPPGFRFHPTDEELVNYYLKRKISGQEIEL-DIIPEVDLYKCEPWELSdKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVT 99 79**************************.99**********85335566888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++ +g+kktLv+y+grap+g +tdWvmheyrl XP_022137682.1 100 S-QNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MAPVGLPPGF RFHPTDEELV NYYLKRKISG QEIELDIIPE VDLYKCEPWE LSDKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVTS QNRPIGMKKT LVYYRGRAPQ 120 GIRTDWVMHE YRLHDNDYCD SDTSAIQDSY ALCRVFKKNG ICSEVEEAGG QSSSSGLSFM 180 DNSTSQTLMN HDYETLSPDV LMAASSSCVE EEEKDDSWMQ FITEDAWCAS NSSPIAGAGA 240 GLDDLSHLTF TNLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-130	NAC family protein