PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137752.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 286aa MW: 31120.4 Da PI: 7.8693

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.9	8.2e-19	136	190	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Le+ F++++ ++ +++ +LA++l+L rqV vWFqNrRa+ k XP_022137752.1 136 RKKLRLTKEQSAILEDSFKEHSSLTPKQKLDLARQLSLRPRQVEVWFQNRRARTK 190 78889************************************************98 PP
2	HD-ZIP_I/II	121.7	3.7e-39	136	224	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq+++LE+sF+e++ L+p++K +lar+L l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++lkeen+rL+ke +eL+ + XP_022137752.1 136 RKKLRLTKEQSAILEDSFKEHSSLTPKQKLDLARQLSLRPRQVEVWFQNRRARTKLKQTEMDCELLKKCCEKLKEENTRLQKELQELK-S 224 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MDGDCSTGTG LLLGLGRSER NPLRSLVPEV DVKKKLVLKF DDILPCLTLG LSGPTPAGFS 60 VAEIIVGKTT AAEELLQQGS SASPVSSFSN SSGSKRDRSD GWIGGGEERE AEAAEIYLER 120 VSSKVGDQED EDGSPRKKLR LTKEQSAILE DSFKEHSSLT PKQKLDLARQ LSLRPRQVEV 180 WFQNRRARTK LKQTEMDCEL LKKCCEKLKE ENTRLQKELQ ELKSLKLTAP PFCMQLQAAT 240 LTVCPSCERS ICGGGGGGDA SPTTAFSIGS KPTFLKFPFN HPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	193	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-44	HD-ZIP family protein