PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137995.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 790aa MW: 90755.2 Da PI: 7.9273

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.5	1.4e-20	72	146	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn+YA+++GF+vr+ + ++s+++g++ +r+fvCskeg++ + +rtgC a ++v+++++gkw+++ ++++HnH+l XP_022137995.1 72 SFYNSYAQHLGFKVRIGQLYRSRTDGTVSSRRFVCSKEGFQLS--------------SRTGCPAVIRVQRRDSGKWVIDLFHKDHNHHL 146 5*************************************876..............589*************************98 PP
2	FAR1	70.5	4.1e-22	227	303	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA ++GF++r+ + +sk++g+it+r+fvCskeg+++++ r gC a +++k++++g+w+v++l+++HnH+l p XP_022137995.1 227 QFYNAYAANAGFRIRIGQLFRSKNDGSITSRRFVCSKEGFQHPS--------------RLGCGAFMRIKRNESGRWVVDRLKKDHNHDLEP 303 6*************************************9994..............789*************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MDKLLGTHLT NMASSDTDLN NEQCENALIV KAYPIGMVRA TDMDEVGGEN AGNCMLEPYV 60 GQEFDSADAA LSFYNSYAQH LGFKVRIGQL YRSRTDGTVS SRRFVCSKEG FQLSSRTGCP 120 AVIRVQRRDS GKWVIDLFHK DHNHHLECDG EETPPPVLQV KAPRSARLTV NVSHRRKVHL 180 FKNVEDDFLC PSRIINTKHL NERANVVQRK GEPCVGLEFN SANEAYQFYN AYAANAGFRI 240 RIGQLFRSKN DGSITSRRFV CSKEGFQHPS RLGCGAFMRI KRNESGRWVV DRLKKDHNHD 300 LEPQTEAQKR NLIASKRLIG ELGGGFECKE PVNLNSGLVI KRTRENKICS DWYPGLFEYF 360 QSKQAEDTGF FYAVEVENSN CMSVFWADGR SRFSCSQFGD AIILDTSYRK SAYVVPFATF 420 TGINHHKQPV LLACALVADE SVESFSWLFQ TWLRAMSGCR PLSIIADQDN GIQQAVARVF 480 PGTLHRFSPW QIKEKEQDNL SMLDETFRFE YEKCVYQSQT AEEFDVGWTT LIGKYGLKEN 540 AWFIEMYIKR NNWVPLFLRV TFFAGIPTTD NIESFFGTAF NARTPVAEFI SRYEIGLEKR 600 RDEERKESLN SLNLQGFLQT KEPVEEQCLR LYTHAVFKVF QKELLHCYRY LGFKIFEEAA 660 LSRYLVRRCE NDNEKCVVTV ISTNLTVNCS CKMFEYEGIL CRHIMRVFQI LGIGEIPPCY 720 ILHRWTRNAE YGTLQDMDSD GGPQELKAVM LWSLREAACK YIEAGATSLE KYKLAYEIMR 780 EGGRKLRWQR

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MDKLLGTHLT NMASSDTDLN NEQCENALIV KAYPIGMVRA TDMDEVGGEN AGNCMLEPYV  60
GQEFDSADAA LSFYNSYAQH LGFKVRIGQL YRSRTDGTVS SRRFVCSKEG FQLSSRTGCP  120
AVIRVQRRDS GKWVIDLFHK DHNHHLECDG EETPPPVLQV KAPRSARLTV NVSHRRKVHL  180
FKNVEDDFLC PSRIINTKHL NERANVVQRK GEPCVGLEFN SANEAYQFYN AYAANAGFRI  240
RIGQLFRSKN DGSITSRRFV CSKEGFQHPS RLGCGAFMRI KRNESGRWVV DRLKKDHNHD  300
LEPQTEAQKR NLIASKRLIG ELGGGFECKE PVNLNSGLVI KRTRENKICS DWYPGLFEYF  360
QSKQAEDTGF FYAVEVENSN CMSVFWADGR SRFSCSQFGD AIILDTSYRK SAYVVPFATF  420
TGINHHKQPV LLACALVADE SVESFSWLFQ TWLRAMSGCR PLSIIADQDN GIQQAVARVF  480
PGTLHRFSPW QIKEKEQDNL SMLDETFRFE YEKCVYQSQT AEEFDVGWTT LIGKYGLKEN  540
AWFIEMYIKR NNWVPLFLRV TFFAGIPTTD NIESFFGTAF NARTPVAEFI SRYEIGLEKR  600
RDEERKESLN SLNLQGFLQT KEPVEEQCLR LYTHAVFKVF QKELLHCYRY LGFKIFEEAA  660
LSRYLVRRCE NDNEKCVVTV ISTNLTVNCS CKMFEYEGIL CRHIMRVFQI LGIGEIPPCY  720
ILHRWTRNAE YGTLQDMDSD GGPQELKAVM LWSLREAACK YIEAGATSLE KYKLAYEIMR  780
EGGRKLRWQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein