PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022138002.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ARR-B

Protein Properties

Length: 668aa MW: 73464.6 Da PI: 6.4685

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022138002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.3	8e-29	204	257	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_022138002.1 204 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 257 79*****************.******************************8 PP
2	Myb_DNA-binding	42.6	1.4e-13	206	256	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_022138002.1 206 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 256 678***********************************************7 PP
3	Response_reg	75.7	1.7e-25	26	134	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+ +y ev+ ++ +e+al ll++ + +D++l D+ mp+mdG++ll+ i e +lp+i+++ + ++ + + + G XP_022138002.1 26 VLVVDDDPTCLMILEKMLRICRY-EVTKCSRAEDALSLLRRYKngFDIVLSDVHMPDMDGFKLLEYIGLEM-DLPVIMMSVDDGKNVVMKGVTHG 118 89*******************.***********999999******************6654.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l + XP_022138002.1 119 ACDYLIKPVRIEALKN 134 **********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MSTASSSSVR KAAEAVPDQF PAGLRVLVVD DDPTCLMILE KMLRICRYEV TKCSRAEDAL 60 SLLRRYKNGF DIVLSDVHMP DMDGFKLLEY IGLEMDLPVI MMSVDDGKNV VMKGVTHGAC 120 DYLIKPVRIE ALKNIWQHVV RKRKNEWKDL EQSGCVDDVD RQQKTNEDAD YSSSANEGSW 180 RNSKRRKDDV EDAEERDDSS TLKKPRVVWS VELHQQFVAA VNQLGIDKAV PKKILELMNV 240 PGLTRENVAS HLQKYRLYLR RLSGITQHQS NLNNTFMSAQ EATFGPMSSL NGLDLQTLAA 300 ASQLQPQSLA TLQAAGFGRP TAKSGLPMPL VDQRNHIFSF ENPKLRFGDG QQQHLNSSKP 360 VNLLHGIPTT MEPKQLANLQ HSAQSHGNMT MQANAQVGQS SSQLMQTPQP QARAQILNES 420 TSTSVTRLPP TIQQSILPNG TTGGVLARNE FTNNSRGGGY NLVTPASTMI NFPMNQTAEL 480 PGNSFPLQST PGMSSIVQKG RFSDGVNSDI KGSEGFVPSY EMFRDLHPQK PHDWDLQHVG 540 VTFDASQGSL ALDIPPSAFA HQGYASSQQN GQNRNAATAG KAMFLLEEET GNGNSQNMGQ 600 QLNSIFVDGS VRVKVERVAP DTGSQTDLFP EHFGQEDLMS ALLKQQQGSI GTAENGVDHF 660 GLVSRESM

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MSTASSSSVR KAAEAVPDQF PAGLRVLVVD DDPTCLMILE KMLRICRYEV TKCSRAEDAL  60
SLLRRYKNGF DIVLSDVHMP DMDGFKLLEY IGLEMDLPVI MMSVDDGKNV VMKGVTHGAC  120
DYLIKPVRIE ALKNIWQHVV RKRKNEWKDL EQSGCVDDVD RQQKTNEDAD YSSSANEGSW  180
RNSKRRKDDV EDAEERDDSS TLKKPRVVWS VELHQQFVAA VNQLGIDKAV PKKILELMNV  240
PGLTRENVAS HLQKYRLYLR RLSGITQHQS NLNNTFMSAQ EATFGPMSSL NGLDLQTLAA  300
ASQLQPQSLA TLQAAGFGRP TAKSGLPMPL VDQRNHIFSF ENPKLRFGDG QQQHLNSSKP  360
VNLLHGIPTT MEPKQLANLQ HSAQSHGNMT MQANAQVGQS SSQLMQTPQP QARAQILNES  420
TSTSVTRLPP TIQQSILPNG TTGGVLARNE FTNNSRGGGY NLVTPASTMI NFPMNQTAEL  480
PGNSFPLQST PGMSSIVQKG RFSDGVNSDI KGSEGFVPSY EMFRDLHPQK PHDWDLQHVG  540
VTFDASQGSL ALDIPPSAFA HQGYASSQQN GQNRNAATAG KAMFLLEEET GNGNSQNMGQ  600
QLNSIFVDGS VRVKVERVAP DTGSQTDLFP EHFGQEDLMS ALLKQQQGSI GTAENGVDHF  660
GLVSRESM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	0.0	ARR-B family protein