PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022138009.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CPP

Protein Properties

Length: 788aa MW: 85763.4 Da PI: 5.8024

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022138009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.7	3.4e-16	491	529	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_022138009.1 491 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 529 689**********************************96 PP
2	TCR	50.5	4e-16	576	614	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_022138009.1 576 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 614 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 788 aa Download sequence
MDTPERNQIG TTSVSKFEDS PVFNYINNLS PIQPVKSIHT TQTFNSLSFA SLPSVFTSPH 60 VSSYKESRFL RRHSDADLSK PDFSSENGNK VGTDGGVTGN VAQLPDNSSV PHGNSDSLAN 120 PSTELPSEHL LSTKEEPQAT KCDSPRPDCD QKLPDCVIKL GEDPPLSNPC VQNKSGNGSS 180 EAEGNKQVIS HTEEREGTGY DWESLITEGA DLLIFSSPNG SEAIRLVQKP LDLVTGFTSS 240 TLSQIMENDN TNLSKMRIAD PIESSGVQHE IEFPSSQAGE ACEIKDMDQA VEGLSYPNSN 300 NSMSREITDD EVAKYITDDC KPVSNLYRGM RRRCLDFEAA VSRRKNLEDG SNSGSVSTHA 360 EEKMTSMDKQ LIPYKSGGVP ARCMLTGIGL HLNALATTSK DTKNLNHEKF SSERQLSLPN 420 SSASCHSPST GLDPLLTSVV TERDVDPSEN GVQNEEDASR ASAYVLAEDF NQNSPKKKRR 480 RLEHAGETES SCKRCNCKKS KCLKLYCECF AAGVYCIEPC SCQDCFNKPI HEDTVLATRK 540 QIESRNPLAF APKVIRNSDS LPEPGDESNK TPASARHKRG CNCKKSSCLK KYCECYQGGV 600 GCSISCRCEG CKNAFGRKDG SSLLGIETEQ EEEETESNQK SVVDKALQGP EIQNNEEQNP 660 GSAIPSTPLQ LCRQLVSLPF SSRGKPLRSS FLNVGSSSGF YAGHKLEKPN ILRPQPDLGK 720 NTKPVSEDEM PDILRGDCSP GAGVKTGSPN SKRISPPQSD FGLSPLPRTG RKLILQSIPS 780 FPSLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 788 aa Download sequence

MDTPERNQIG TTSVSKFEDS PVFNYINNLS PIQPVKSIHT TQTFNSLSFA SLPSVFTSPH  60
VSSYKESRFL RRHSDADLSK PDFSSENGNK VGTDGGVTGN VAQLPDNSSV PHGNSDSLAN  120
PSTELPSEHL LSTKEEPQAT KCDSPRPDCD QKLPDCVIKL GEDPPLSNPC VQNKSGNGSS  180
EAEGNKQVIS HTEEREGTGY DWESLITEGA DLLIFSSPNG SEAIRLVQKP LDLVTGFTSS  240
TLSQIMENDN TNLSKMRIAD PIESSGVQHE IEFPSSQAGE ACEIKDMDQA VEGLSYPNSN  300
NSMSREITDD EVAKYITDDC KPVSNLYRGM RRRCLDFEAA VSRRKNLEDG SNSGSVSTHA  360
EEKMTSMDKQ LIPYKSGGVP ARCMLTGIGL HLNALATTSK DTKNLNHEKF SSERQLSLPN  420
SSASCHSPST GLDPLLTSVV TERDVDPSEN GVQNEEDASR ASAYVLAEDF NQNSPKKKRR  480
RLEHAGETES SCKRCNCKKS KCLKLYCECF AAGVYCIEPC SCQDCFNKPI HEDTVLATRK  540
QIESRNPLAF APKVIRNSDS LPEPGDESNK TPASARHKRG CNCKKSSCLK KYCECYQGGV  600
GCSISCRCEG CKNAFGRKDG SSLLGIETEQ EEEETESNQK SVVDKALQGP EIQNNEEQNP  660
GSAIPSTPLQ LCRQLVSLPF SSRGKPLRSS FLNVGSSSGF YAGHKLEKPN ILRPQPDLGK  720
NTKPVSEDEM PDILRGDCSP GAGVKTGSPN SKRISPPQSD FGLSPLPRTG RKLILQSIPS  780
FPSLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	475	482	PKKKRRRL
2	476	481	KKKRRR
3	478	482	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-143	CPP family protein