PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022138011.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Nin-like

Protein Properties

Length: 945aa MW: 105267 Da PI: 6.3237

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022138011.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.6	5.8e-29	626	675	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k+i+l++l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_022138011.1 626 KTITLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 675 89**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 945 aa Download sequence
MDDSMLSPAT MLEAPADTAM DLDYMDGLLL DGCWLETADG TEFLHHSPSS FGVNLDPLIG 60 WPAIEINGDF NMGQITRSNQ EEPRKISTDE TFLGRENIDG GQEGCSGRSE NNALEGSESC 120 RRLWIGPGEH LGSGSSVMER LIRAVGYIKD FVRDKDVLVQ VWVPINRGGR SFLITNDLPF 180 TQNSSCTRLA KYRDISVKYE FTADEDSKKA LGLPGRVFSR KVPEWTPDVQ FFRSDEYPRV 240 NHAYEHDVRG TIALPIFEQG GRNCLGVIEV VMVTRQIKYG SELENVCKAL EAVKLRSSDV 300 IGHPNKQVFN RSNEAVLLQI EDTLKSACET HGLPLAQTWA PCIQQAMEGC RHSDENYICC 360 VSTVDRACYV ADPCIREFHE ACSEHHLLRG EGIVGMAFKS NEPCFSSDIT SFCNTEYPLS 420 HHAKLFGLHA AVAIRLRSMH ISKADFVLEF FLPVNCRDPE KQRMLLTSLS TIIQRSCQSL 480 RLVTDEECRE EKMQQSCRSL HLVTDVKLGE ESNSPFRDAG VSANGRLGMQ EMSKVQHHQL 540 EMSHPTNSLI TSSVQNIQQC GGSVSLFHEG KTTEGLSSSG YQHHELSYDL NGVVEDSEEC 600 TTMTNGSFSD MVIGRTGERR RTKVDKTITL QVLRQYFAGS LKDAAKSIGV CPTTLKRICR 660 QHGIKRWPSR KIKKVGHSLQ KLQLVIDSVE GASGAFQIGS LYTNFQELAS PNLSGSGTLL 720 SAKMGDCVKT SSNQNEVGMN NLQAAASKSP SSSCSQSSSS SQCFSSRSLQ NPPHWNDVGS 780 EDQMGGENPC DGELKRVKSE VELHVSTMEG PNVPRRSQSC KSLCKHPATE CLIHSAKEGE 840 RKAEANEVQR VKVSYGEEKY RFRVHNGWGY EELLNEIARR FSISDMSIFD LKYLDDESEW 900 VLLTSDTDLQ ECFHVYKSSR MQTIKLSLQV SRCHKKNYVA SSGFS

Sequence ? help Back to Top

Protein Sequence Length: 945 aa Download sequence

MDDSMLSPAT MLEAPADTAM DLDYMDGLLL DGCWLETADG TEFLHHSPSS FGVNLDPLIG  60
WPAIEINGDF NMGQITRSNQ EEPRKISTDE TFLGRENIDG GQEGCSGRSE NNALEGSESC  120
RRLWIGPGEH LGSGSSVMER LIRAVGYIKD FVRDKDVLVQ VWVPINRGGR SFLITNDLPF  180
TQNSSCTRLA KYRDISVKYE FTADEDSKKA LGLPGRVFSR KVPEWTPDVQ FFRSDEYPRV  240
NHAYEHDVRG TIALPIFEQG GRNCLGVIEV VMVTRQIKYG SELENVCKAL EAVKLRSSDV  300
IGHPNKQVFN RSNEAVLLQI EDTLKSACET HGLPLAQTWA PCIQQAMEGC RHSDENYICC  360
VSTVDRACYV ADPCIREFHE ACSEHHLLRG EGIVGMAFKS NEPCFSSDIT SFCNTEYPLS  420
HHAKLFGLHA AVAIRLRSMH ISKADFVLEF FLPVNCRDPE KQRMLLTSLS TIIQRSCQSL  480
RLVTDEECRE EKMQQSCRSL HLVTDVKLGE ESNSPFRDAG VSANGRLGMQ EMSKVQHHQL  540
EMSHPTNSLI TSSVQNIQQC GGSVSLFHEG KTTEGLSSSG YQHHELSYDL NGVVEDSEEC  600
TTMTNGSFSD MVIGRTGERR RTKVDKTITL QVLRQYFAGS LKDAAKSIGV CPTTLKRICR  660
QHGIKRWPSR KIKKVGHSLQ KLQLVIDSVE GASGAFQIGS LYTNFQELAS PNLSGSGTLL  720
SAKMGDCVKT SSNQNEVGMN NLQAAASKSP SSSCSQSSSS SQCFSSRSLQ NPPHWNDVGS  780
EDQMGGENPC DGELKRVKSE VELHVSTMEG PNVPRRSQSC KSLCKHPATE CLIHSAKEGE  840
RKAEANEVQR VKVSYGEEKY RFRVHNGWGY EELLNEIARR FSISDMSIFD LKYLDDESEW  900
VLLTSDTDLQ ECFHVYKSSR MQTIKLSLQV SRCHKKNYVA SSGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein