PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138111.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family Dof
Protein Properties Length: 217aa    MW: 23331.8 Da    PI: 8.9749
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.86.7e-403089261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    ke+alkcprC+s+ntkfCyynnyslsqPryfCkaCrryWt GG+lrnvPvGgg+rknk +
  XP_022138111.1 30 KEEALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWTDGGSLRNVPVGGGSRKNKIR 89
                    67899****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MDTPHWPQME GAGAGGSKGN LLERKARPAK EEALKCPRCN SSNTKFCYYN NYSLSQPRYF  60
CKACRRYWTD GGSLRNVPVG GGSRKNKIRS DHKIKINGSD QNPKIHHTQD LNLAILPSST  120
SSSSSSSHSL LLGSFMAAPS AGLGFSLEGF ENSGYGNLHH HHHQHQHQHQ DQTAAMFPIE  180
DLKQPNGAAA AAGAGFEHGG GESGGGFWNG MLGGGSW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12329ERKARPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.17e-38Dof family protein