PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138122.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 203aa    MW: 21999.4 Da    PI: 9.9551
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH216.1e-0753901354
                    HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    R+++N++f+ L++l+P++    s+K +   i+ +++++I  L
  XP_022138122.1 53 RKEMNQSFDVLQSLVPNL----SPKATRENIVSETIQFIDFL 90
                    99***************9....8****************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MEACTDSVIP LLTQILPVRE SEAADHNKAS TSRKRRRADL EAGGGLQKGR AKRKEMNQSF  60
DVLQSLVPNL SPKATRENIV SETIQFIDFL EKQLMRLEMK KKLPSESVIA TMIPPSTNSD  120
SSGGGGVIVS ASGNIVLFGI LASVRRGMVT QILMAFERNQ AEVLAANVAV SHGNLSLTIT  180
ASVHGYIENA IEKIKNDILS LNK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13337RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-07bHLH family protein