PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138146.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 295aa    MW: 32833.4 Da    PI: 6.1408
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138146.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.6e-182572148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd  l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
   XP_022138146.1 25 RGPWTVEEDITLINYIANHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 72
                     89********************************************97 PP
2Myb_DNA-binding49.59.6e-1678121146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++
   XP_022138146.1  78 RGNITLEEQLLILELHSRWGNR-WSKIAQQLP-GRTDNEIKNYWRT 121
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDGSKEKRFD AGSFHGGEDD GDLRRGPWTV EEDITLINYI ANHGEGRWNS LARCAGLKRT  60
GKSCRLRWLN YLRPDVRRGN ITLEEQLLIL ELHSRWGNRW SKIAQQLPGR TDNEIKNYWR  120
TRVQKHAKQL KCDVNSKQFK DTMRYLWMPR LVERIQAAAT AAASSAAAPP TIVNNNGNDF  180
VGTPQVTPSY TSENSSTGTG GGGVSSDGTQ VSSVSDLTDC YNNFRVGDCF PMGYSQEPPP  240
LQSPAGGFFN QGMLDFQAME QSSSQWLPDG GVDMSESLWN GAGADDLWFL QQQLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.14e-86MYB family protein