PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138207.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 189aa    MW: 21044.3 Da    PI: 8.4981
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.8e-11249454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ah ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  XP_022138207.1  2 AHIAVERNRRRQMNEHLRVLRSLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                    8*************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MAHIAVERNR RRQMNEHLRV LRSLTPCFYI KRGDQASIIG GVIEFIKELH QVLQSLESNK  60
RRRKSVSPSP GPSPRRQVVV ADHGLFGFEN NAGEVGASCN SSVADVEAKI SGSNVLLKII  120
SRRIPGQLSK MISVLEGLSF EVLHLNVSSM DDTVLYSFVV KIGLECQLSL EELAFEVQQS  180
FCSQVYLCQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-76bHLH family protein