PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138245.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family FAR1
Protein Properties Length: 250aa    MW: 28702.2 Da    PI: 6.9586
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR192.65.1e-2986173291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  XP_022138245.1  86 FYNSYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSP 173
                     ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MEFGVDGDSE VVGNSTVVED SKPLDENETG VSSIERIFDQ DRDEKIIQDS SGRNAILDSV  60
PGLPVVQADE PYVGQEFDNE AAAHAFYNSY ATRVGFVIRV SKLSRSRRDG TAIGRALVCN  120
KEGYRMPDKR EKIVRQRAET RVGCRAMILV RKVNSGKWVV TKFVKEHTHP LSPGKSRRDC  180
IYDQYPNEHD KIRELSQQLA VEKKRSATYK RHLEVIFEYI EEHNDNLSRK IQHIVENVKE  240
MESIEQQNHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-110FAR1 family protein