PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022138292.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 1163aa MW: 129377 Da PI: 8.7602

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022138292.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.4	7.6e-09	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e++++a +++G++ Wk++a+ + +R+ +++ XP_022138292.1 46 QWSKDEVEQFYEAYRKYGKD-WKKVASAVK-NRSMEMV 81 6***************99.****9.98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1163 aa Download sequence
MAPSRKSRSV NKRFSSANEA SSSKYVEDAS KSKQKKRKFA DLLGPQWSKD EVEQFYEAYR 60 KYGKDWKKVA SAVKNRSMEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLRGSES 120 EQESNEDSGA TRKAQKRLRG KSRNNNSKGL DAHFGDASQL QSLPTDYGCL SLLKKRRSGI 180 KPHAVGKRTP RVPVTYSYDK DSREKLFSPF RHNSKAKVDD RNDDEVAHEI ALALTEASQR 240 DGSPQLSQTP NPKIEGHVLS PTRNDRMRSE SDMMSTKFRC XEMDEGGCEL SLGSNGADNA 300 DYDLGKNTRE IQRKGKRYYG KKPEVEESMY NHLDDIKEAC SGTEEGQKSG SLRGKLETED 360 LDVKSVRSSF KGPRKRSKKA LFGGDECSAF DALQTLADLS LMMPDTTADT EPSAKVKEEK 420 LDVMDKSKMK GNHSAAGAEI STFKTSKTGK AFGNNIGSIP EAERIQGSNN GNRKRKQKSS 480 PFKISSKDED NNDSRVSDTS KIKAADEAKS SIGKVKRSPH NAGPAKPGKI SKPPDHSSSS 540 TDHKREDGEY ALSMTQVPSA NPIILPTKVR SRRKMALRKS QRDSKIADNI SIDQLNIIAQ 600 PLDDRSHDLK EQHSNCLSWY KLRRWCIFEW FYSAIDYPWF AKCEFVEYLN HVGLGHIPRL 660 TRVEWGVIRS SLGRPRRFSA QFLKEEKQKL NQYRESVRKH YAELRAGTRE GLPTDLARPL 720 SVGQRVIAIH PKTREIHDGG VLTVDYSRCR VQFDRPELGV EFVMDIECMP LNPVENMPAN 780 LARHGVALDK IFGNLNEVKI NGLLKEAKIE DYMKSTSNEK LESTDGSVFI SPSTHHINKL 840 IKQAKVDLGC SHLQTKFGLT ETVSIQQEAS SQPSALAQIQ AKEADVHALS ELSRALDKKE 900 VVVSELKRLN DEVLENQING DNLLKDSENF KKQYAAVLLQ LHEVNEQVSS ALFCLRQRNT 960 YQGTSPLMFL KPVHDLGDSC CHAQEPGSHV AEIVGSSRAK AQTMIDEAMQ TILTLKKGES 1020 NLESIEEAID FVSNRLSVDD LALPTARLTA ADTSNATPVS QNHFSACASN PSTANHVVGP 1080 KSNGPSDKNE VEVPSELIAH CVATLLMIQK CTERQFPPCD VAQVLDSAVN SLQPCCPQNL 1140 PLYAEIQKCM GIIRSQILAL IPT

Sequence ? help Back to Top

Protein Sequence Length: 1163 aa Download sequence

MAPSRKSRSV NKRFSSANEA SSSKYVEDAS KSKQKKRKFA DLLGPQWSKD EVEQFYEAYR  60
KYGKDWKKVA SAVKNRSMEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLRGSES  120
EQESNEDSGA TRKAQKRLRG KSRNNNSKGL DAHFGDASQL QSLPTDYGCL SLLKKRRSGI  180
KPHAVGKRTP RVPVTYSYDK DSREKLFSPF RHNSKAKVDD RNDDEVAHEI ALALTEASQR  240
DGSPQLSQTP NPKIEGHVLS PTRNDRMRSE SDMMSTKFRC XEMDEGGCEL SLGSNGADNA  300
DYDLGKNTRE IQRKGKRYYG KKPEVEESMY NHLDDIKEAC SGTEEGQKSG SLRGKLETED  360
LDVKSVRSSF KGPRKRSKKA LFGGDECSAF DALQTLADLS LMMPDTTADT EPSAKVKEEK  420
LDVMDKSKMK GNHSAAGAEI STFKTSKTGK AFGNNIGSIP EAERIQGSNN GNRKRKQKSS  480
PFKISSKDED NNDSRVSDTS KIKAADEAKS SIGKVKRSPH NAGPAKPGKI SKPPDHSSSS  540
TDHKREDGEY ALSMTQVPSA NPIILPTKVR SRRKMALRKS QRDSKIADNI SIDQLNIIAQ  600
PLDDRSHDLK EQHSNCLSWY KLRRWCIFEW FYSAIDYPWF AKCEFVEYLN HVGLGHIPRL  660
TRVEWGVIRS SLGRPRRFSA QFLKEEKQKL NQYRESVRKH YAELRAGTRE GLPTDLARPL  720
SVGQRVIAIH PKTREIHDGG VLTVDYSRCR VQFDRPELGV EFVMDIECMP LNPVENMPAN  780
LARHGVALDK IFGNLNEVKI NGLLKEAKIE DYMKSTSNEK LESTDGSVFI SPSTHHINKL  840
IKQAKVDLGC SHLQTKFGLT ETVSIQQEAS SQPSALAQIQ AKEADVHALS ELSRALDKKE  900
VVVSELKRLN DEVLENQING DNLLKDSENF KKQYAAVLLQ LHEVNEQVSS ALFCLRQRNT  960
YQGTSPLMFL KPVHDLGDSC CHAQEPGSHV AEIVGSSRAK AQTMIDEAMQ TILTLKKGES  1020
NLESIEEAID FVSNRLSVDD LALPTARLTA ADTSNATPVS QNHFSACASN PSTANHVVGP  1080
KSNGPSDKNE VEVPSELIAH CVATLLMIQK CTERQFPPCD VAQVLDSAVN SLQPCCPQNL  1140
PLYAEIQKCM GIIRSQILAL IPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	473	503	RKRKQKSSPFKISSKDEDNNDSRVSDTSKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein