PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138436.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 274aa    MW: 31361.9 Da    PI: 5.0027
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.51.9e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd +l   ++ +G  +W++ ++  g+ R++k+c++rw +yl
   XP_022138436.1 14 RGPWSPEEDRILTTFIHNHGHSNWRALPKLAGLLRCGKSCRLRWTNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding53.27.1e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l
   XP_022138436.1  67 RGNFTKEEEDTIINLHELLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MGRAPCCEKM GLKRGPWSPE EDRILTTFIH NHGHSNWRAL PKLAGLLRCG KSCRLRWTNY  60
LKPDIKRGNF TKEEEDTIIN LHELLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRLQKNT  120
KISPPKSQNK RKNQTKPQNS SHSSSIIIMS PSSQQSSSCE ISSVTDSYVT ENEYYSYEAE  180
EDAVALVEAL PLIDESFWSE VVIENEINEN ENNENGSNSN YYGEVQTEFP IMSMDHMVEL  240
NDDDKSNGQS LDDDMEFWYD VFIKAGGISE LPEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-81MYB family protein