PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022138453.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 265aa MW: 31378.3 Da PI: 10.1035

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022138453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.5	1.5e-18	20	67	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+ +G g+W+++a+ g++R +k+c++rw +yl XP_022138453.1 20 KGPWTAEEDRLLIEYVRVHGEGRWNSVAHLAGLKRNGKSCRLRWVNYL 67 79********************************************97 PP
2	Myb_DNA-binding	49.3	1.1e-15	73	117	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ ++ ++++++G++ W+tIar ++ gRt++++k++w+++ XP_022138453.1 73 RGQITPHEESIIQELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 117 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MMMMGGHFGW GKVEEEGWRK GPWTAEEDRL LIEYVRVHGE GRWNSVAHLA GLKRNGKSCR 60 LRWVNYLRPD LKRGQITPHE ESIIQELHAR WGNRWSTIAR SLPGRTDNEI KNYWRTHFKK 120 KVKVPSNFSE KPNTRFLRKH QYQQQQQRQQ QYRELLLRQQ QQRELLQQQQ QQQLNQQLHM 180 KTEHVNSSQT QTRQESCMGL MSNFNSQITD HHDQPGSLLL SVPEATSMEE LWDGFLWNFE 240 DFQGNFTLSS ALGKANGHNL VKPFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	2e-76	MYB family protein