PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138615.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YB
Protein Properties Length: 144aa    MW: 16087.1 Da    PI: 4.786
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138615.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB145.11.5e-4520115297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +e +++lPianv+r+mk++lPanakisk+aket+qec+sefi+fvt+eas+kc+r+ r+t++gddl+ al +lGf+d++ pl+ yl kyre e++
  XP_022138615.1  20 KEPENLLPIANVGRLMKQILPANAKISKEAKETMQECASEFIGFVTGEASEKCRRDARRTVTGDDLCSALESLGFDDFAGPLRRYLCKYREQEED 114
                     677899**************************************************************************************998 PP

           NF-YB  97 k 97 
                     +
  XP_022138615.1 115 E 115
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MEGDSGADAS EISGNGGILK EPENLLPIAN VGRLMKQILP ANAKISKEAK ETMQECASEF  60
IGFVTGEASE KCRRDARRTV TGDDLCSALE SLGFDDFAGP LRRYLCKYRE QEEDEQKVNK  120
SEERRRLRWV MNPNDAVSVN FIRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.13e-46NF-YB family protein