PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022138656.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 337aa MW: 37481.5 Da PI: 8.1441

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022138656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.1e-17	52	100	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl XP_022138656.1 52 KGPWSPEEDAKLKSYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 100 79*********************************************97 PP
2	Myb_DNA-binding	37.6	5.1e-12	107	149	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022138656.1 107 GDFSEEEDRIICSLYVSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 149 689****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MSFPPLIPII TLSLSPLPSL SLSLSLSLSH NFSTLQFAMG RAPCCDKANV KKGPWSPEED 60 AKLKSYIEQH GTGGNWIALP QKIGLKRCGK SCRLRWLNYL RPNIKHGDFS EEEDRIICSL 120 YVSIGSRWSI IAAQLPGRTD NDIKNYWNTR LKKKLFGKHH QQQLVRRGRK IKTEIGNSMA 180 IVFDHNHAFN QSPYLPELSP ALNSPPPYSN YQDHHHAAGR LLFSDHQPLQ FPSQFPYGQT 240 GGAAQLAVED VGSGPRIPGC HVGELEKLVY SNTASFEDGM QFLYEEDGSS KNGNSGLISD 300 LDWGEMSSLI SAPLLYPSSV ANDLMIGSSY NLEQQKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	8e-81	MYB family protein