PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138928.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family SRS
Protein Properties Length: 310aa    MW: 32669.5 Da    PI: 9.0145
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702188.52.5e-581192896154
          DUF702   6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrel......kskkqsalss 88 
                       C+dCGn+akk+C ++RCRtCCk rg +C+thvkstWv+aa+rrerq    +    +a+        ++a +kr+r l       +++++++s+
  XP_022138928.1 119 GVCRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGDggssgsSSAGAKRPRVLipsqstAAAAAASASH 213
                     47*********************************************987766554444444566666778888888877766544555666778 PP

          DUF702  89 tklssaeskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                     +++s+a++++++etss          lP +v+++avfrc rv++++ ge elaYq++v+igGhvfkG+LydqG+++
  XP_022138928.1 214 ASTSNATTPRSFETSSnhqdasfkksLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDD 289
                     889999999999999999*******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MNRTMLGLRD VLFIAPTPSS LHQQTTQIIS SDHHPSLPLP SSAALGVSVG IFPLLAATPC  60
LPQPPPPPPP AAEVSERRGV DNLKRTQDFG FGKGDSLIAG GNNALDEPVR GDAGDSSMGV  120
CRDCGNRAKK ECDYRRCRTC CKGRGNHCST HVKSTWVSAA RRRERQMLVV MDGVATASGD  180
GGSSGSSSAG AKRPRVLIPS QSTAAAAAAS ASHASTSNAT TPRSFETSSN HQDASFKKSL  240
PGQVRAPAVF RCHRVTAISS GEGELAYQAT VNIGGHVFKG FLYDQGIDDK NGFPSVSHLH  300
LESGNHHHKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.18e-57SRS family protein