PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139072.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HB-other
Protein Properties Length: 339aa    MW: 38463.2 Da    PI: 4.5656
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.71.1e-09274321754
                     --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox   7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     ++k qle+Le+++++++ p+ +++  + + ++L+ +++  WF   Ra 
  XP_022139072.1 274 LKKVQLETLERVYRRTKRPTNSMISSIVQVTNLPRKRIVKWFEDERAE 321
                     6789****************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MAFSATVKAP EALPCSPSIS GRDSFLFRRQ FPSNFTLPRR PPSRLTLSLT FARRRNQKSA  60
FSSSSSSSKK KKRNSFPKEA RDKEENEEDV DGDALEALFS LLEEDLKNDE LSLDDDDGEG  120
DEFSEEDLAK LERELGLALG IDDEEEEEAE EEAEEEVEDL GDKEEVEMTV KLKNWQLRRL  180
ASALKKGRRK TSIKSLAAEL CLDRAIVLDL LREPPPNLLM LSATLSDTPT PSVPETKTIQ  240
TTDEEPIVDT TEEAEVMKGP VHVMQQSWIV QKRLKKVQLE TLERVYRRTK RPTNSMISSI  300
VQVTNLPRKR IVKWFEDERA EEGVPDQRLP YDPSAPKSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15373RRRNQKSAFSSSSSSSKKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.12e-67HB-other family protein