PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139139.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 255aa MW: 28259.6 Da PI: 8.7055

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.1	3e-11	12	55	4	45
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++e d+ + +a + ++ + +W++Ia+ ++ g+tl+++k ++ XP_022139139.1 12 WSQEQDKAFENALATYPEDasyRWEKIAADVP-GKTLEEIKYHYE 55 ******************************.********95 PP
2	Myb_DNA-binding	39.1	1.7e-12	102	146	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++ +r + +Rt+ q+ s+ qky XP_022139139.1 102 AWTEDEHRLFLLGLDKYGKGDWRSMSRNFVVTRTPTQVASHAQKY 146 7*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MTVDKDGKSS IWSQEQDKAF ENALATYPED ASYRWEKIAA DVPGKTLEEI KYHYELLVDD 60 VKQIESGFIP LPSYSFSSDD NSESRVGSKA SRSDQERRKG TAWTEDEHRL FLLGLDKYGK 120 GDWRSMSRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRS SIHDITNVDN RDLAAPQGPI 180 TGEVNNSQGS STIKSTKQPP QPPAGPSVVG IGVPFVSAVG TPVNTPPPHM AYAVRSQVIG 240 SLVPRPAVNM SPMTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	2e-99	MYB family protein