PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139173.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 334aa    MW: 36900 Da    PI: 8.4055
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00043214236123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +Cg  F++   L  H+r+H
  XP_022139173.1 214 HECAICGAEFTSGQALGGHMRRH 236
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEVVNQDAKE QQGIAKGKRT KRQRLHSPIP FAVSANSEDS NNFVAENNYV GVAQNPNSSP  60
ATASSSAAAV AAADQFQYNS TEEEEEDMAN CLILLAQGRS LCSPKRVAGS FVSNRRFAEN  120
AGVVGTDKGA AAAAGGCYGY ECKTCYRTFP SFQALGGHRA SHKKPKAMEA EKKLFLSSDD  180
EEMQFKNSNN ITHPLSLQLS QRGNLYSSGK AKVHECAICG AEFTSGQALG GHMRRHRAMP  240
VGTNTALSLT PMPIEPEDQR QPKRQRSVLS LDLDLNLPAP QEHDHRESKF MIKSNHHQQQ  300
QQQQHQQQHN NNKQQQQQQQ PLVFSTRPLV DCHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.14e-55C2H2 family protein