PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139214.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 246aa    MW: 26811.3 Da    PI: 6.501
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.76.5e-18153186134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022139214.1 153 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 186
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MIGNSFADEI DCGSFFDHID DLLDFPVEDV DAGLPPAKGG DSANSFPTIW PTHSESLPVS  60
DSVFSANSNS DLSAELSVPV SIRSRFLLTR VKVSCLQSIV FRSPSGHVTK PLLGPASTRP  120
DPVQTYLFNN FSLAPLDQAN QNSPSPPQSV RKCMHCEITK TPQWRAGPMG PKTLCNACGV  180
RYKSGRLFPE YRPAASPTFI PSLHSNSHKK VLEMRSKTDD NTAIITISVQ PELIPNTNSA  240
ISMDYM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-43GATA family protein