PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139645.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 586aa    MW: 65262.2 Da    PI: 5.8831
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS420.81.2e-1282165851373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+elL++cA+a++++ +e  ++l+a+ +  +s +g+p+qRl ay++e+L ar   s+  +y+al+++e +   s + l+++++++e++P+lkf++
  XP_022139645.1 216 LKELLIACAKALAENRMEDFDNLVATARGAVSISGEPIQRLGAYMVEGLVARKEASGACIYRALNCREPA---SNDLLSYMHMLYEICPYLKFGY 307
                     5799*****************************************************************9...9999****************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+HiiDf+i+qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+  + + le +++rLa++ ++ ++p+ef+  v     d
  XP_022139645.1 308 MAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKyaRGDGLEVVERRLAEISRKYDIPVEFHG-VPVFAPD 401
                     *******************************************************999999**************************.688899* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ ++L+++pgEalaVn+ lqlh+++desv+++++rd +L++vkslsPkvv++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr++++ri
  XP_022139645.1 402 IRCDMLDIRPGEALAVNFPLQLHHTPDESVNVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFVETLNYYLAIFESIDVTLPRNNKKRI 496
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+++ivnv+aceg er+erhe ++kW++rl++aGF++ pls+++++ ++ ll  ++ + y++ e++g+++lgWk+r+L+s+SaW
  XP_022139645.1 497 NVEQHCLAKDIVNVIACEGIEREERHELFGKWKSRLTMAGFRQFPLSSYVNNVIRGLLGYYS-EHYTLVERDGAMLLGWKNRNLISASAW 585
                     **********************************************************9999.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    
MDSHQIFGFG VNSAGVSYTS SYSSVPSLPN TYLGPLNFNL RNSPTSLFSS SHLDSDSFTT  60
PSDSQDQRYS PENLSGLSPS CNSSFETNSF HHTASPYLDH CEESRGIYSG TSAFDYEGCS  120
TENIRYALKQ LETALMGPDN EEVASKPDAS FGESSRPQMM GQRSYSWSQD RRGSNIGQSQ  180
TSSVSRSQQP EAVHLGKRQK SLDESLLQGG FPSDNLKELL IACAKALAEN RMEDFDNLVA  240
TARGAVSISG EPIQRLGAYM VEGLVARKEA SGACIYRALN CREPASNDLL SYMHMLYEIC  300
PYLKFGYMAA NGAIAEACRN EDRIHIIDFQ ITQGTQWLTL LQALAARPSG APHVRITGID  360
DPVSKYARGD GLEVVERRLA EISRKYDIPV EFHGVPVFAP DIRCDMLDIR PGEALAVNFP  420
LQLHHTPDES VNVNNPRDGL LRMVKSLSPK VVTLVEQESN TNTTPFFNRF VETLNYYLAI  480
FESIDVTLPR NNKKRINVEQ HCLAKDIVNV IACEGIEREE RHELFGKWKS RLTMAGFRQF  540
PLSSYVNNVI RGLLGYYSEH YTLVERDGAM LLGWKNRNLI SASAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-162GRAS family protein