PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139653.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 252aa MW: 28607.8 Da PI: 7.0091

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.5e-16	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll ++++ +G g+W+ a++ g++Rt+k+c++rw++yl XP_022139653.1 16 RGPWTIEEDTLLTHYIACHGEGHWNNLAKYAGLKRTGKSCRLRWLNYL 63 89********************************************97 PP
2	Myb_DNA-binding	47.3	4.8e-15	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++ +++++ ++G++ W++I++ ++ gRt++++k++w++ XP_022139653.1 69 RGNLTPQEQLVILELHSKWGNR-WSKISQQLP-GRTDNEIKNYWRT 112 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MAIRSCNNAT ESELRRGPWT IEEDTLLTHY IACHGEGHWN NLAKYAGLKR TGKSCRLRWL 60 NYLKPDIKRG NLTPQEQLVI LELHSKWGNR WSKISQQLPG RTDNEIKNYW RTRVQKQAKQ 120 LNIESNSQKF FETVRHLWIP RLLHKMDQTS SSSSSSSSSS SQSFFSAPVF QNYPSSSSSE 180 PAINEAAVSE TASTSDHGFG NSDVHTWQPP SGHFQLDPLS VLGAEFDAPV APPDWFLQDD 240 VAESFWNLEC LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	8e-83	MYB family protein