PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139700.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 244aa MW: 26608.2 Da PI: 9.1527

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.6e-19	47	92	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw + XP_022139700.1 47 KGPWSAEEDRILTRLVERYGPRNWSLISRYVK-GRSGKSCRLRWCNQ 92 79***************************9.*********985 PP
2	Myb_DNA-binding	53.9	4.1e-17	101	143	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ed+ ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_022139700.1 101 PFSPAEDDAIIAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 143 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MNNYNNNNNN YNNSSSSPST SESSSSDSSL SGKPRPRATA GGPDKIKGPW SAEEDRILTR 60 LVERYGPRNW SLISRYVKGR SGKSCRLRWC NQLCPGVEHR PFSPAEDDAI IAAHARYGNR 120 WATIARLLPG RTDNAVKNHW NSTLKRRVRE QRRSAGEFAG GNDNADVVGG GSSASAPFGA 180 VDDDPLTALT LATPGIGSGS DVAPASDHRS ETLPAGFWEM MRDVIAREVR EYMTTTFSEN 240 SGFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	3e-56	MYB family protein