PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140129.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 176aa    MW: 20141.2 Da    PI: 5.9427
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.21.4e-201057249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                     +++ s rqvtfskRrng++KKA+ L +LC+ e+a+++fs+ gk + +
  XP_022140129.1 10 MVKDRSSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSF 57
                    67899**************************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MGRRKIEMKM VKDRSSRQVT FSKRRNGLFK KANDLATLCG LEIAIVVFSP GGKAFSFGHP  60
NVEDVIDRYL NHESEPIPPA REAGMIEKEN EELLDLIKQL QLEKRRGEIL EKEMKSKEES  120
IKIEDLNFDE LLKLKESLEK LRENVKIKAS ELEASSSLLL LANEPVMEAD RSDTKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-35M-type_MADS family protein