PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140291.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 238aa    MW: 26441 Da    PI: 6.0795
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.41.9e-1180128455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++  rE+ RRd++N++f eL  +l +    + +K +K++iL  A++ + +Lq
  XP_022140291.1  80 SKACREKLRRDKLNERFLELAAILEPG---KPPKTDKVAILSDAIRMVTDLQ 128
                     6789**********************9...99***************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MDYSSGNWNW LFDYTTMDDI AVAAADFSPP QSISFTWSNP SINFSSKDSL DVDCSCGDQD  60
SLQEVGRKRP RAETSAASAS KACREKLRRD KLNERFLELA AILEPGKPPK TDKVAILSDA  120
IRMVTDLQCE TQKLKESKED LKAKIKELKV EKNELRDEKQ RLRAEKEKLE LQIKAANTQA  180
ADVQRPPSAL SAAFTAQGQA AGNKLMPFIG YPGIAMWQFL PPAAIDISQD HVLRPPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16672GRKRPRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-85bHLH family protein