PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140359.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 195aa    MW: 21203.8 Da    PI: 5.6577
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140359.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260135.22.4e-42351341100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca+ Cvlapyfp ++p+kfa++h+++Gasn++k+l++lpe++r da+sslvyeA ar+rdPvyG++g i +lq+q+++l+a+la
  XP_022140359.1  35 PCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLA 129
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022140359.1 130 KAQAE 134
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MEGSDTITAV SSTPLSQSPS PSPSSSSPPS VILSPCAACK ILRRRCADRC VLAPYFPPTD  60
PAKFAIAHRV YGASNIIKFL QELPESQRAD AVSSLVYEAS ARIRDPVYGS AGAICQLQKQ  120
VNELQAQLAK AQAELVNMQC QQANLVALVC REFAQSHQSV DDFNSNSPHS GFQSINQSYF  180
EDTNVNPLWE PLWTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.18e-63LBD family protein