PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022140615.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 243aa MW: 27976.1 Da PI: 6.7173

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022140615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd +l +v+++G+ W+ ++r g++R++k+c++rw++yl XP_022140615.1 14 RGAWSLEEDHKLTAYVEKYGPWKWRQVPRLAGLTRCGKSCRLRWLNYL 61 89****************88**********************97 PP
2	Myb_DNA-binding	55.4	1.4e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T eE +l+ ++++++G++ W+tIa++++ gRt++++k++w+ + XP_022140615.1 67 RGNYTNEENDLICKLHEKYGNR-WSTIAAKLP-GRTDNEVKNHWNAH 111 899*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MVRAPVVDEN GLKRGAWSLE EDHKLTAYVE KYGPWKWRQV PRLAGLTRCG KSCRLRWLNY 60 LRPGIKRGNY TNEENDLICK LHEKYGNRWS TIAAKLPGRT DNEVKNHWNA HLKKQVNPKG 120 AAASSQPKPK QLTSSQIKLA KTEPSFFDYS SLEFGILESS SLSRQTFSSD DNFGIMNWAV 180 EDYDHSTGYG DFWSEPFIWD DRNNVGHVPD PDASWEFSSD YGIFSPHHET TYDDYVDLFC 240 SLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28110.1	7e-51	MYB family protein