PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022140622.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

LBD

Protein Properties

Length: 222aa MW: 25027.1 Da PI: 8.8491

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022140622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	111.8	4.9e-35	14	102	1	89
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 aCaaCk++r+kC + C+lapyfpa+++++f++vhk+FG+snv+k++k+++ee+r++a++sl++eA +r++dPv G +g ++++ ++l+ XP_022140622.1 14 ACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKV 102 7*****************************************************************************99998887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MQRHNNAALQ PAAACAACKH QRKKCHDTCP LAPYFPADRN REFQAVHKVF GVSNVTKMVK 60 NVREEDRRKA VDSLIWEAVC RQNDPVLGPY GEYRRVLEEL KVCKLLSQNQ SQGQNPFAGY 120 KPIMPCFGGW NNGTNSTNNN GNGIMGININ GGVNSSNLFN YLHDNLSAII DSSHYSNSST 180 YNLQSPEKLI RLQQDKEITS SVVVPLQQQV QQQQHPNFHQ LY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	1e-43	LBD family protein