PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140691.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 747aa    MW: 81710.5 Da    PI: 5.7686
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-2093149157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k+
  XP_022140691.1  93 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKN 149
                     688999************************************************995 PP
2START218.22.7e-682774971206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el ++a+ +ep+W++      + +n+de+l++f+++ +     ++ ea+r+s+vv+m++ +lve+l+d++ qW++ +     +a+tl
  XP_022140691.1 277 ELAVAAMEELTRMAQMGEPLWMTALdgstSVLNEDEYLRTFPRGIGpkpsgFKCEASRESAVVIMNHINLVEILMDVN-QWSTLFSgivsRAMTL 370
                     57899********************999999************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq++++e+q++splvp R++++vRy++q+ +g+w++vdvS+d  ++ p    + R++++pSg+li++++ng+skvtwvehv
  XP_022140691.1 371 EVLSTGvagnynGALQVITSEFQVPSPLVPtRESYYVRYCKQHADGTWAVVDVSLDDLRPTP----GLRCRRRPSGCLIQEMPNGYSKVTWVEHV 461
                     ************************************************************99....6**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wv tl+rqce+
  XP_022140691.1 462 EVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCER 497
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
MPAGIMTPAR NMPSMIGRNG NNVAGFGSSS GLALSQPSMM DGQLLPLDMP HNTSESDLAR  60
IRDDDFDSAT KSGSDNNHEL ASGDDQDPRP NKKKRYHRHT QHQIQEMEAF FKECPHPDDK  120
QRKELSRELG LEPLQVKFWF QNKRTQMKNQ HERHENTQLR TENEKLRADN MRYREALSNA  180
SCPNCGGPTA IGEMSFDEHH LRLENARLRE EIDRISAIAA KYVGKPVVNY PLLSPPVPSR  240
PLELGMGNFG GDIYGSAGDL IRSISAPTEA DKPMIIELAV AAMEELTRMA QMGEPLWMTA  300
LDGSTSVLNE DEYLRTFPRG IGPKPSGFKC EASRESAVVI MNHINLVEIL MDVNQWSTLF  360
SGIVSRAMTL EVLSTGVAGN YNGALQVITS EFQVPSPLVP TRESYYVRYC KQHADGTWAV  420
VDVSLDDLRP TPGLRCRRRP SGCLIQEMPN GYSKVTWVEH VEVDDRGVHN LYKQLVSSGQ  480
AFGAKRWVTT LDRQCERLAS AMATNIPTGD VGVITSQEGR KSMLKLAERM VISFCAGVSA  540
STTHTWTTLS GTGADDVRVM TRKSIDDPGR PPGIVLSAAT SFWLPVPPKR IFDFLRDENS  600
RSEWDILSNG GVVQEMAHIA NGRDTGNCVS LLRVNSANSS QSNMLILQES CTDPTASFVI  660
YAPVDIVAMN VVLNGGDPDY VALLPSGFAI LPDGGGGEGG SLLTVAFQIL VDSVPTAKLS  720
LGSVATVNNL IACTVERIKA SLSCDTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein