PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140719.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 226aa    MW: 25663.2 Da    PI: 9.1146
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.7e-122876555
                    HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     + +E++RR++++  +++L++llP  +   ++  ++ ++ +e+A++YIksL+
  XP_022140719.1 28 RKVMEKNRRNQMKLLYSKLKSLLPDqP---SNVAMNVSDQVEEAINYIKSLE 76
                    6789*********************66...9999****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEGNREIRQW QTQPPPPPPL AAGTKVERKV MEKNRRNQMK LLYSKLKSLL PDQPSNVAMN  60
VSDQVEEAIN YIKSLETKLK RQQEKKEWLL RSGRSSSDDV GRNLPELKIR EMGSAVEVVL  120
TSGLGDWFIF YQIIHIFPEE RAQIINASYS VLGTTVFYTL HAEIEDVVYE FGARKLTERL  180
KKLVYGSTSD AEITQPSAAA SYIHPPGAAA AYTPTTYNPH FRSHEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-25bHLH family protein