PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140741.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YC
Protein Properties Length: 230aa    MW: 26099.2 Da    PI: 9.7847
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140741.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC43.28.6e-14122212999
           NF-YC   9 qiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     + e++ + k  ++P+ rikki + ++   +i  ea  l+ ka e+f++++   ++  + + ++++l    ++++v + + +dfl d vp++
  XP_022140741.1 122 EEEEQVEEKIYKFPMHRIKKITRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEK 212
                     355666677889***********9999999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MASSKKSSTE AKSKEAGTSK SATKTKAKAK TKTLSNATKS DKDVSKKNNN KKKISNKKHA  60
NNGSAEENDV FEISAPDSAS REDDADEDRT ETTSRKANSS KSKKVKRNHG KKEENGYEEE  120
EEEEEQVEEK IYKFPMHRIK KITRDENSDL RINQEALFLV NKATEMFLVQ FCKDAYACCA  180
QDRKKSLAYK HLSSVVCKRK RYDFLSDFVP EKLKFEDALK ERSMAESGKG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183201RKKSLAYKHLSSVVCKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.12e-32NF-YC family protein