PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022140853.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 200aa MW: 22808.4 Da PI: 9.7807

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022140853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.5	2.4e-30	12	62	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCda++aviifs++g+lye++s XP_022140853.1 12 KRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQIAVIIFSQKGRLYEFAS 62 79***********************************************86 PP
2	K-box	65.7	1.7e-22	84	175	7	98
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 k ++ + ++l++e++ + ++ie q +qR+llG +L+s+sl eLq++ qL++sl iR++K +l++eqie+l++ke+ l e+n +L+ k XP_022140853.1 84 KIDKQLQLQELKNEAESISEKIELVQLSQRKLLGYGLDSCSLDELQEIDAQLQRSLFLIRARKAQLYKEQIEQLKEKERLLLEKNARLSLKA 175 33677789*******************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MAEMVRGKVE MKRIENATSR QVTFSKRRNG LLKKAYELSV LCDAQIAVII FSQKGRLYEF 60 ASSDIQRIVE RYRKCARDGK NNSKIDKQLQ LQELKNEAES ISEKIELVQL SQRKLLGYGL 120 DSCSLDELQE IDAQLQRSLF LIRARKAQLY KEQIEQLKEK ERLLLEKNAR LSLKAAAHGG 180 AAALGCRSSP SCEVDTQLFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62165.3	2e-67	MIKC_MADS family protein