PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022140854.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 197aa MW: 22477 Da PI: 9.9178

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022140854.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.5	2.3e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCda++aviifs++g+lye++s XP_022140854.1 9 KRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQIAVIIFSQKGRLYEFAS 59 79***********************************************86 PP
2	K-box	65.7	1.6e-22	81	172	7	98
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 k ++ + ++l++e++ + ++ie q +qR+llG +L+s+sl eLq++ qL++sl iR++K +l++eqie+l++ke+ l e+n +L+ k XP_022140854.1 81 KIDKQLQLQELKNEAESISEKIELVQLSQRKLLGYGLDSCSLDELQEIDAQLQRSLFLIRARKAQLYKEQIEQLKEKERLLLEKNARLSLKA 172 33677789*******************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MVRGKVEMKR IENATSRQVT FSKRRNGLLK KAYELSVLCD AQIAVIIFSQ KGRLYEFASS 60 DIQRIVERYR KCARDGKNNS KIDKQLQLQE LKNEAESISE KIELVQLSQR KLLGYGLDSC 120 SLDELQEIDA QLQRSLFLIR ARKAQLYKEQ IEQLKEKERL LLEKNARLSL KAAAHGGAAA 180 LGCRSSPSCE VDTQLFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62165.3	2e-67	MIKC_MADS family protein