PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141070.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 223aa    MW: 25717.8 Da    PI: 9.6736
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.82.2e-193891456
                    -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++f++ q++ Le+ F++ +++++ +++ +LA++lgL+ rqV +WFqNrRa++k
  XP_022141070.1 38 KRRFSDVQIRSLESIFYSsDSKLDPRKKVQLATELGLQPRQVAIWFQNRRARWK 91
                    568**************98**********************************9 PP
2HD-ZIP_I/II118.53.6e-3837129293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +krr+s+ q+++LE+ F +++ kL+p++Kv+la+eLglqprqva+WFqnrRAR+k+kq+E+d+++L+++yd+l+++ ++L++e ++L ++l++
  XP_022141070.1  37 NKRRFSDVQIRSLESIFYSSDsKLDPRKKVQLATELGLQPRQVAIWFQNRRARWKSKQMENDFRSLRANYDNLASQFKSLQEERNSLLSQLQK 129
                     69***************88777*******************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MKRNDYFTVA NYETVAVVSS QTCSTPVRRK KKSNSMNKRR FSDVQIRSLE SIFYSSDSKL  60
DPRKKVQLAT ELGLQPRQVA IWFQNRRARW KSKQMENDFR SLRANYDNLA SQFKSLQEER  120
NSLLSQLQKL SELVQGRPCE GYNNYRIDKK RLENGGHDQG LPVTHLLKDG SNDTGHTKEK  180
SCHLLNPNGS YETSDKWCGF DSDGGVVFEY QPCSSLQWPN FCG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18694RRARWKSKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.22e-34HD-ZIP family protein