PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141093.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 218aa    MW: 25511.8 Da    PI: 8.4949
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.31.1e-0785105526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ f+  G C++Gd C +aHg
  XP_022141093.1  85 ACPAFRN-GNCPRGDFCEYAHG 105
                     6777777.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MMFQGFFPGI NNAVFDHDFS GCHQLMEQVE DAAAVFGSDE FRMFAYKIQR CPRTRSHDWT  60
ECPYAHRGEK AQRRDLRRFN YSAVACPAFR NGNCPRGDFC EYAHGVFEYW LHPARYRTRA  120
CNAGRFCQRK VCFFAHTPEQ LRSETKQKFH FNAHRTRVPV VAVEAPLESK NDDVSNIVNG  180
LKGLTVREIR ERKNDRNFGW EVSDSDLPHI GWIRELLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07500.14e-71C3H family protein