PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141193.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 224aa MW: 25960.1 Da PI: 5.1528

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	92.8	1.6e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +rienk nrqvtfskRrng+lKKA+ELSvLCd++va+iif s+gkl+e+ss XP_022141193.1 9 ERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSS 59 69***********************************************96 PP
2	K-box	82.6	8.7e-28	82	171	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 l+e++ +e++kL++++e+Lqr++R++lGe+Le+L+lkeL++Le+qL+k l++ R++K e++l+ + el+k+e++l ++n++L++klee XP_022141193.1 82 LDESDV--QIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMEQDLGDQNTELKSKLEE 171 444433..368******************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MGRGKVVLER IENKVNRQVT FSKRRNGLLK KAYELSVLCD VDVALIIFYS RGKLFEFSST 60 DMNKILERYH QRCYSSGSTS NLDESDVQIE EVSKLRAKYE SLQRSHRNFL GEELEPLNLK 120 ELHNLEKQLD KTLSQARQRK AEIMLQRLAE LRKMEQDLGD QNTELKSKLE EGQRRLQQSE 180 DGQGDPEEQV PNYEVVGEEP NMSSRCFDVQ EEEEARAAMA GGRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	5e-64	MIKC_MADS family protein