PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141199.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 210aa    MW: 22974.1 Da    PI: 10.3615
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.4e-1987137255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp + g  +r++lg++ tae+Aa a+++a+ +++g
  XP_022141199.1  87 HYRGVRRRP-WGKYAAEIRDPAKSG--ARVWLGTYETAEDAALAYDRAAFQMRG 137
                     69*******.**********96654..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MDVENRASLT YDSSDLIISS LTDQWPDFPL KLNDMIVFNS LHDAVVFGLS PLHSSSAAAQ  60
LPTVKPDPGF SAPTKALSPP LGCRGQHYRG VRRRPWGKYA AEIRDPAKSG ARVWLGTYET  120
AEDAALAYDR AAFQMRGSKA LLNFPNRIGS GDPPPHRVSA RRRQHDLIIT TQGLANASAK  180
RRKATANKEA KPVRDSQMAM LPVGEQLLVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161183RRRQHDLIITTQGLANASAKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.13e-38ERF family protein