PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141229.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 260aa    MW: 29953.2 Da    PI: 9.6425
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-1086136254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + +h erEr+RR+++ s +  Lr+llP  +   ++K   ++    Av+YIk+ 
  XP_022141229.1  86 KIMHRERERQRRQEMGSLYMSLRTLLPLEF--IKGKRAISDQMNGAVNYIKHQ 136
                     568*************************65..*******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MYPLQKAEEK CFQISFNPHQ HIIPEDLIFG RHVSEDQQHN NNNNYGVNNN NLPNIRRRRK  60
LHHQLTTHLD NLHASGGVSD LDHNAKIMHR ERERQRRQEM GSLYMSLRTL LPLEFIKGKR  120
AISDQMNGAV NYIKHQKKKI KEIEAKRDEL KKLDDNNWNR FEKSRGQTPI CSFKISSFGG  180
GLEIVITTSG FNGFPLSRIL KVVVEQGLDV ISCSSSSVNE KSIHTVQMEV RDLTSLDLPQ  240
LEKKLTEAVP LLRPVIDQQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-23bHLH family protein