PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141645.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 183aa    MW: 20772.1 Da    PI: 4.0568
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.41.7e-151781690
                    EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3 16 lvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
                    ++lpkk ae+h   ++++e++ +t+ d++g  +W++k+++  +++s++yvl+ ++ +Fv+a+gL+ gDf++ + d+ ++ 
  XP_022141645.1  1 MILPKKAAEAHlpALESKEGIIMTMDDLDGaHVWSFKYRFwpNNNSRMYVLE-NTGDFVNAHGLQLGDFIMVYQDH-QNH 78
                    68***********77777999*********99******9989999999***9.*****************999544.444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MILPKKAAEA HLPALESKEG IIMTMDDLDG AHVWSFKYRF WPNNNSRMYV LENTGDFVNA  60
HGLQLGDFIM VYQDHQNHKY AIQAKKASEQ EIYSDIAKNV VDVEINDIIF SDYDDVTKAN  120
PIYMPYPTVD DDPGMSFIYD TSSAFADDSP FDFLDGSMTT NYSRMGPLEG FGSVENLSLD  180
DFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.11e-70B3 family protein