PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141682.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 224aa    MW: 24223.9 Da    PI: 4.5102
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.5e-192472355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++l+g
  XP_022141682.1 24 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSLRG 72
                    67******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MSPSPSKPKR KQPPPPPETA SHRFLGVRRR PWGRYAAEIR DPSTKERHWL GTFDTAEEAA  60
LAYDRAARSL RGSLARTNFL YSDSPPPLPP SAAVSHGQLP PPPLPPPLFL PLLPPDSPPL  120
FDQFPAAGDS SASFFAGFDD GGAELPPFPP AISSESENYN YNNCLMETQN IGLESLDQSS  180
MGIGSYFGFD SGGEYVQSPI FGTMPAVSDA LASDFESPAN FYFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-19ERF family protein