PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141797.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 197aa    MW: 21844.5 Da    PI: 5.6265
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000162850123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H++ H
  XP_022141797.1 28 YECTFCKRGFTNAQALGGHMNIH 50
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEIDEAGAGC EIQDEDQVMI QEEHIRSYEC TFCKRGFTNA QALGGHMNIH RKDKAKMKQS  60
ASSSSLSMSS NKMPVDDISK IISTPARLPW VIPSTTTEGR GRGEDRGEIG EITSSTMEET  120
LKGKVQQLQL FEKSSNMDQK FRVHQVLPLE ASSDQKMVPP FQHGSTVSEL DLELRLGPEP  180
QNSTPSSTPT GSSRHFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.15e-15C2H2 family protein