PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141961.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 220aa MW: 25005.4 Da PI: 5.7781

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	70.2	1.9e-22	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqv fskRr+g++KKA+EL +LCdae+ + +fs +gkl++y+s XP_022141961.1 9 KKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLFVFSASGKLFDYAS 59 689**********************************************86 PP
2	K-box	33.9	1.4e-12	88	169	15	96
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + ++ akL++e+e+ +e+R+++Ge+L+ L ++eL++Le+ L+ +l+++ + + ++ i++ +k ++l een++L++ XP_022141961.1 88 QLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKVDMLVEENQRLNQ 169 55566679***********************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MTRKKIQIKK IDNIAARQVA FSKRRKGLFK KAKELAILCD AEIGLFVFSA SGKLFDYASS 60 SMQGLLERHN SVHSENLPNL NEPSVELQLE SNMRAKLNEE VEKKTHELRQ MKGEELQGLG 120 MEELKKLEKS LQGGLNRVSE MMDGRNIDLI HDIERKVDML VEENQRLNQL QEVEKMTDQM 180 QNMQGNSSES IVNNCSSSNP SQDYDSSDTS LKLGLPSLEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	9e-43	MIKC_MADS family protein