PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142115.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family Dof
Protein Properties Length: 249aa    MW: 27569.8 Da    PI: 9.2263
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142115.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.72.2e-373289360
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                     + +kcprCds ntkfCyynnyslsqPry+Ck+CrryWt+GG+lrnvPvGgg+rk k+
  XP_022142115.1 32 PQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGGCRKGKR 89
                    6789***************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MQRRDHDEIM KAVQERRLKG NLQVQNQVQA QPQPQKCPRC DSLNTKFCYY NNYSLSQPRY  60
LCKTCRRYWT QGGTLRNVPV GGGCRKGKRP KPSSDNTRST QPLLPPPPRS PVVQQISLSA  120
TPQPIIFSGT PIMTTSSSYF NPGEEVGSSS RWVNSFVSSQ IGQSQIQASE IIYEMMDHHQ  180
SAGKAAVNNS SSPAAAWPET YINNNSSNPL AAVGDTIVWT SGNSTTAVDQ SSLDPNQWPD  240
YMRGFCPPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.18e-23Dof family protein