PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142195.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family SBP
Protein Properties Length: 140aa    MW: 15355.8 Da    PI: 7.4391
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP135.12.2e-4253128176
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                     +Cq++gC+adls a+ yhrrhkvCe+h+ka+vv+++gleqrfCqqCsrfh++sefDe+krsCrrrLa+hnerrrk+
  XP_022142195.1  53 RCQADGCNADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKS 128
                     6*************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MASWGGTPEE DEEEEEEDGG GGGEVGFGEE ERKIRRALSG GRCGGAGRST VARCQADGCN  60
ADLSGARPYH RRHKVCEFHA KAAVVILAGL EQRFCQQCSR FHAVSEFDET KRSCRRRLAG  120
HNERRRKSLS SEFHGGQSST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.11e-39SBP family protein