PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142255.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 343aa MW: 39065.7 Da PI: 5.5969

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142255.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.5	3.6e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl XP_022142255.1 14 KGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.6	2.5e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_022142255.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGRTPCCEKD GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHNPRL DLLDLSSILG SSLYSCNIPS SQMNSFSRLI GIHNSINPEL LRLANSFMKS 180 PNFLLQNVEQ ESQNYVVSQL QLVPQVPHQI DQSSPLPPLH EVSGCSPSTT ATSCGGETQL 240 LDPSNFLDFN YSQNYPNPNE IPSNLNHFSS LDCAQVPNYD FEEPHQQYMD YPSSETSTLN 300 SNSTYFSANN GNGTDQDERE SYCSEILKFE IPDLLDVNPF MQL

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGRTPCCEKD GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHNPRL DLLDLSSILG SSLYSCNIPS SQMNSFSRLI GIHNSINPEL LRLANSFMKS  180
PNFLLQNVEQ ESQNYVVSQL QLVPQVPHQI DQSSPLPPLH EVSGCSPSTT ATSCGGETQL  240
LDPSNFLDFN YSQNYPNPNE IPSNLNHFSS LDCAQVPNYD FEEPHQQYMD YPSSETSTLN  300
SNSTYFSANN GNGTDQDERE SYCSEILKFE IPDLLDVNPF MQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	3e-93	MYB family protein